dat_gene2path_chip | demo result of gene2pathway function from chip seq data |
dat_gene2path_RNA | demo result of gene2pathway function from RNA seq data |
dat_seq2pathway_GOterms | demo result of seq2pathway function from chip seq data |
dat_seq2pathway_Msig | demo result of seq2pathway function from chip seq data |
Des_BP_list | Description of GO term BP |
Des_CC_list | Description of GO term CC |
Des_MF_list | Description of GO term MF |
gencode_coding | Coding gene list in GENCODE 20. |
gene_description | demo data of adding gene description |
GO_BP_list | Gene symbol list of GO term BP |
GO_CC_list | Gene symbol list of GO term CC |
GO_GENCODE_df_hg_v19 | intersection genes of GO terms and GENCODE 19 |
GO_GENCODE_df_hg_v36 | intersection genes of GO terms and GENCODE 36 |
GO_GENCODE_df_mm_vM1 | intersection genes of GO terms and GENCODE vM1 |
GO_GENCODE_df_mm_vM25 | intersection genes of GO terms and GENCODE vM25 |
GO_MF_list | Gene symbol list of GO term MF |
MsigDB_C5 | MsigDB data set |
Msig_GENCODE_df_hg_v19 | intersection genes of MSigDB collection and GENCODE 19 |
Msig_GENCODE_df_hg_v36 | intersection genes of MSigDB collection and GENCODE 36 |
Msig_GENCODE_df_mm_vM1 | intersection genes of MSigDB collection and GENCODE vM1 |
Msig_GENCODE_df_mm_vM25 | intersection genes of MSigDB collection and GENCODE vM25 |