basicDecoder |
convert binary output of GET()$content to list |
CCLE_drts |
compounds_v1: serialization of compounds info from PharmacoDb v1 |
cell_lines_v1 |
compounds_v1: serialization of compounds info from PharmacoDb v1 |
compoundsByCell |
initial version of compound browser over pharmacoDb cells |
compounds_v1 |
compounds_v1: serialization of compounds info from PharmacoDb v1 |
datasets_v1 |
compounds_v1: serialization of compounds info from PharmacoDb v1 |
DRProfile-class |
DRProfSet is a class for managing dose-response information about cell lines from a pharmacogenomics dataset |
DRProfSet |
DRProfSet is a class for managing dose-response information about cell lines from a pharmacogenomics dataset |
DRProfSet-class |
DRProfSet is a class for managing dose-response information about cell lines from a pharmacogenomics dataset |
DRTraceSet |
DRTraceSet class manages dose-response information for a single cell line, multiple drugs |
DRTraceSet-class |
DRTraceSet class manages dose-response information for a single cell line, multiple drugs |
getDrugs |
DRProfSet is a class for managing dose-response information about cell lines from a pharmacogenomics dataset |
getDrugs-method |
DRProfSet is a class for managing dose-response information about cell lines from a pharmacogenomics dataset |
iriCCLE |
obtain an example trace set stored locally, for irinotecan and selected cell lines |
plot-method |
DRProfSet is a class for managing dose-response information about cell lines from a pharmacogenomics dataset |
plot-method |
DRTraceSet class manages dose-response information for a single cell line, multiple drugs |
rxdbQuery_v1 |
very simple query formulation, build queries using endpoints of bhklab PharmacoDB API |
tissues_v1 |
compounds_v1: serialization of compounds info from PharmacoDb v1 |
topEndpoints_v1 |
enumerate top level endpoint terms for bhklab PharmacoDB API |
traces |
trace extractor |
[-method |
subscripting on DRProfSet extracts a profile for a single drug whose name constitutes the index |