NetSAM-package |
Network Seriation and Modularization |
consensusNet |
Construction of a consensus coexpression network |
featureAssociation |
Calculate the associations between modules and sample features |
GOAssociation |
Identify the associated GO terms for each module |
mapToSymbol |
Map other ids to gene symbols |
MatNet |
Construction of correlation network from a matrix |
MatSAM |
Correlation network construction, seriation and modularization from a matrix |
mergeDuplicate |
Merge the duplicate Ids in the matrix data |
NetAnalyzer |
Network analyzer |
NetSAM |
Network Seriation and Modularization |
netsam_output |
An example of the list object returned by NetSAM function |
testFileFormat |
Test whether the data matrix and the annotation have a correct format |