msigdb-package | The Molecular Signatures Database (MSigDB) |
appendKEGG | Add KEGG pathway derived gene sets to a collection |
getIMEX | Retrieve IMEx PPI hosted on the hub |
getIMEXVersions | Get IMEX versions included in the msigdb package |
getMsigdb | Retrieve MSigDB data hosted on the hub |
getMsigdbIDF | Retrieve MSigDB data hosted on the hub |
getMsigdbVersions | Get MSigDB versions included in the msigdb package |
getMsigIdType | Infer gene identifier type for the gene set collection |
getMsigOrganism | Infer organism type for the gene set collection |
listCollections | List all collection types within a MSigDB gene set collection |
listSubCollections | List all sub-collection types within a MSigDB gene set collection |
msigdb | The Molecular Signatures Database (MSigDB) |
subsetCollection | Subset collections and sub-collections of MSigDB |